BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B10LP1|AL428677
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1461 1695 0.0
>3x_Contig1461
Length = 5478
Score = 1695 bits (851), Expect = 0.0
Identities = 877/887 (98%), Gaps = 2/887 (0%)
Strand = Plus / Minus
Query: 1 gatcagagaaaaagaagtgaattgcggccactactgagcaagaatgtacgtcgggtttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4264 gatcagagaaaaagaagtgaattgcggccactactgagcaagaatgtacgtcgggtttga 4205
Query: 61 gaaccggcgtggtctgttggaatgcagctatattaagtggcaacaagatggctatctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4204 gaaccggcgtggtctgttggaatgcagctatattaagtggcaacaagatggctatctggg 4145
Query: 121 ttgtttcatctctttcttattgttcttagaggagttatatgtagaagtaaacaatgagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4144 ttgtttcatctctttcttattgttcttagaggagttatatgtagaagtaaacaatgagaa 4085
Query: 181 tacgggatgtgaaaatttttcatctcataagtggcgtctaaatgtgatactatgtaggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4084 tacgggatgtgaaaatttttcatctcataagtggcgtctaaatgtgatactatgtaggta 4025
Query: 241 ggttaagggagaaaaaaaaaaaaaaaaaaaaaagaaaaagaaatgtgcattaccgctatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4024 ggttaagggagaaaaaaaaaaaaaaaaaaaaaagaaaaagaaatgtgcattaccgctatc 3965
Query: 301 atccaaacgttcgaaggtcacatctcttctgcagagggggaaaaaaaaaaaagattgcmg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3964 atccaaacgttcgaaggtcacatctcttctgcagagggggaaaaaaaaaaaagattgcag 3905
Query: 361 cccctgagtttcgcgtatggtcmcccmctacmctactcggtcaggctcttaccagcttaa 420
| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||
Sbjct: 3904 cacctgagtttcgcgtatggtcacccactacactactcggtcaggctcttaccagcttaa 3845
Query: 421 ctacagttgatcggmcgggaaacggtgctttctggtagatatggccgcaaccgaaatctt 480
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3844 ctacagttgaccggacgggaaacggtgctttctggtagatatggccgcaaccgaaatctt 3785
Query: 481 aagcagttacagtggtagtagttgtgtctggcttacggttgtagtatgttgttaggccaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3784 aagcagttacagtggtagtagttgtgtctggcttacggttgtagtatgttgttaggccaa 3725
Query: 541 tttatttaggaagtgggctagctaactttattgtttgcttagatatattttttcaattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3724 tttatttaggaagtgggctagctaactttattgtttgcttagatatattttttcaattat 3665
Query: 601 ttttcattttttcattttttcatttttttatttttttatttttttatttttttataattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3664 ttttcattttttcattttttcatttttttatttttttatttttttatttttttataattg 3605
Query: 661 gcttcttgtgggatgtatagttttttttatttttcataccggatcycccaatactttgaa 720
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3604 gcttcttgtgggatgtatagttttttttatttttcataccggatctcccaatactttgaa 3545
Query: 721 aaacatgcaaaaactaaaaatcagatatagaaaagagaaagatacttcgatgataaattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3544 aaacatgcaaaaactaaaaatcagatatagaaaagagaaagatacttcgatgataaattg 3485
Query: 781 aataaagcagcgggaacagtgataatgtgttcctaaactgtgtgatgatatgcgaacgta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3484 aataaagcagcgggaacagtgataatgtgttcctaaactgtgtgatgatatgcgaacgta 3425
Query: 841 tcattaattgaaatgacttattttgaaatgcaatttaacatttacac 887
||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 3424 tcattaa-tgaaatgactta-tttgaaatgcaatttaacatttacac 3380
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 34,720
Number of Sequences: 1807
Number of extensions: 34720
Number of successful extensions: 5658
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)